Cyclic aromatic donor-acceptor foldmers with a hairpin turn

ORGN 188

Chelsea R. Martinez, seachel@mail.utexas.edu, Department of Chemistry and Biochemistry, University of Texas at Austin, 1 University Station A5300, Austin, TX 78712 and Brent L. Iverson, Department of Chemistry and Biochemistry, The University of Texas at Austin, 1 University Station, A5300, Austin, TX 78712.
We have employed aromatic donor-acceptor interactions between the electron-rich 1,5-dialkoxy-naphthalene (Dan) and electron-poor 1,4,5,8-naphthalene-tetracarboxylic diimide (Ndi) modular units in the past to program both inter- and intramolecular folding and assembly. Solid-phase peptide synthetic methods in concert with native chemical ligation were used to constrain non-alternating sequences of Dan and Ndi into cyclic molecules intended to adopt a hairpin-like folding topology. For example, a trimer of linked Dan-Dan-Ndi units was synthesized and cyclized such that the Ndi intercalates between Dan units in the cyclic structure. We are currently characterizing the structures and properties of the molecules.