| BIOL | Tuesday, 12 September 2006 | ||
4:30 PM-6:30 PM Moscone Center -- Hall D, Poster | |||
Chemistry and Metabolism | |||
| Organizers: | Tadhg Begley Karen N. Allen | ||
| 86 | A fluorescent sensor for ATP based on 2-aminopurine mutants of the ATP aptamer Thomas P. Shields, Jennie Fong, Robert A. Thompson | ||
| 87 | A high throughput screening method to discover synthetic riboswitches Sean A. Lynch, Shawn K. Desai, Hari K. Sajja, Justin P. Gallivan | ||
| 88 | A new fluorescent ribonucleotide reporter: Synthesis, enzymatic incorporation and utilization Srivatsan G Seergazhi, Yitzhak Tor | ||
| 89 | Acetylenic fatty acid biosynthesis: Cloning and expression of the first genes from a Basidiomycete Robert E. Minto, Brenda J. Blacklock, Brian Scheffler, Naomi N. Jayasuriya | ||
| 90 | Activating nucleoside analogs with a novel thymidine kinase from the hyperthermophilic eubacterium Thermotoga maritima Joseph Lichter, Stefan Lutz | ||
| 91 | An oxidation sensing mechanism is used by a global regulator of Staphylococcus aureus Peng R. Chen, Taeok Bae, Wade A. Williams, Erica M. Duguid, Phoebe A. Rice, Olaf Schneewind, Zigang Li | ||
| 92 | Paper Withdrawn | ||
| 93 | Paper Withdrawn | ||
| 94 | Bleomycin is a potent small molecule inhibitor of hepatitis C virus replication Bojana Rakic, Marc Brulotte, John Paul Pezacki | ||
| 95 | Characterization by GC-MS of prostanoid methylesters produced in oxygenation reactions of Cyclooxygenase-1 Aditi M Sengupta, Hemendra N Basu, Steven J Pernecky | ||
| 96 | Chemical biology studies of an RNA transcription molecular switch: Sequence and metal ion effects on T box antiterminator RNA•tRNA binding Jennifer V. Hines, Akwasi Agyeman, Rajaneesh Anupam, Hamid Fauzi, Karen D. Jack, John A. Means, Abigael M. Muchenditsi, Crystal Simson | ||
| 97 | Chemical characterization and anticoagulant activity of sulfated polysaccharides from Monostroma latissium (Chlorophyta) Wenjun Mao, Fang Fang, Huijuan Zhang | ||
| 98 | Cloning and characterization of the tryptophanyl tRNA synthetase from Methanococcus jannaschii Randall A. Hughes, Andrew D. Ellington | ||
| 99 | Co-opting the CoA biosynthetic machinery as an entry into secondary metabolite systems Andrew C Mercer, Michael D. Burkart | ||
| 100 | Comparison of carnosine content in muscles of black-bone silky fowl by a new HPLC: Methodology YingGang Tian, MingYong Xie, WeiYa Wang, HongJing Wu | ||
| 101 | Computational analysis of the binding modes of Formamido-pyrimidine DNA glycosylase bound to DNA containing 8oxodG and FapydG Kun Song, Viktor Hornak, Carlos De los Santos, Arthur P. Grollman, Carlos L. Simmerling | ||
| 102 | Construct replace -disrupted vector to disrupt pksCT gene for citrinin biosynthesis in monascus Guiming Fu, Yang Xu | ||
| 103 | Coupling of a targeting synthetic peptide RGD to Plasmid DNA via Diazo coupling for targeting gene delivery Yanhong Li, Timothy Heath | ||
| 104 | Culturing chemistry in a 3D-biological medium: Probing chemical genetics Sean P Bew, Laurent Legentil, Andrew Chantry, Paul Thomas | ||
| 105 | Defining the molecular basis for associations among glycosphingolipid glycosyltransferases Chad M Whitman, David A. Gross, Cara Beasley, Sandra N Ottensmann, Jennifer J. Kohler | ||
| 106 | Design and synthesis of peptide nucleic acid (PNA) FRET probes and molecular beacons (MBs) for mRNA targeting and direct imaging of gene transcription Bereket Y. Oquare, Huafeng Fang, John Stephen Taylor | ||
| 107 | Detailed phospholipid follow-up during atherogenic modifications of low density lipoprotein particles by 1H NMR spectroscopy at 800 MHz Pasi PK. Soininen, Reino Laatikainen, Katariina Öörni, Hannu Maaheimo, Petri T Kovanen, Kimmo Kaski, Mika Ala-Korpela | ||
| 108 | Detection of 8-nitroguanine in calf thymus DNA produced by a Fenton-like reaction Eric Holwitt, Veronica Franz | ||
| 109 | Detection of quadruplex DNA structures in human telomeres by using a fluorescence probe BMVC molecule Ta-Chau Chang, Cheng-Chung Chang, Jen-Fei Chu, Fu-Jen Kao, Pei-Jen Lou | ||
| 110 | Development of the Golgi two-hybrid assay Danielle H. Dube, Ethan J. Greenblatt, Jennifer J. Kohler | ||
| 111 | DNA charge transport in nucleosome core particles Chad C Bjorklund, William B Davis | ||
| 112 | Effect of N-linked glycosylation on GlcNAc-6-sulfotransferase-1 function Marguerite M. Desko, David A. Gross, Jennifer J. Kohler | ||
| 113 | Efficient substrate cleavage catalyzed by Hammerhead ribozymes derivatized with selenium Zhen Huang, Gary E. Brandt, Nicolas N. Carrasco | ||
| 114 | Enantiomerically pure abscisic acid conjugates for use in chemical genomics Timothy R. Smith, Andrew Marsh, Andrew J. Thompson | ||
| 115 | Engineering a universal human deoxynucleoside kinase Pinar Iyidogan, Stefan Lutz | ||
| 116 | Evaluating binding of small molecules to the HIV-1 DIS with a fluorescence-based assay Victor K Tam, Denise Kwong, Yitzhak Tor | ||
| 117 | Fluorogenic label for biomolecular imaging Luke D. Lavis, Tzu-Yuan Chao, Ronald T. Raines | ||
| 118 | Paper Withdrawn | ||
| 119 | G-quadruplex structure of d(TTAGGG)4 in potassium solution investigated by BMVC molecule Ta-Chau Chang, Cheng-Chung Chang | ||
| 120 | Gas chromatographical research of lipid exchange in patients ill with cystic vaginal fistula Jamshid Y. Nurullaev, Umeda Rakhamatullayeva | ||
| 121 | High-throughput screening: A chemical-genomic investigation of adipogenesis Bridget K. Wagner, Yu-Hua Tseng, Young-kwon Kim, C. Ronald Kahn, Stuart L. Schreiber | ||
| 122 | High-throughput, high-resolution strategy for the rapid structural elucidation of site-selective DNA binding agents Mark A. Lewis, Kristie D. Goodwin, Millie M. Georgiadis, Eric C. Long | ||
| 123 | HIV-1 nucleocapsid protein-catalyzed DNA strand-exchange reactions monitored by a novel quadruplex displacement assay Besik I Kankia, George Barany, Karin Musier-Forsyth | ||
| 124 | Imaging surface ultrafine structure of mitochondria from swine heart with atomic force microscopy Jie Zhu | ||
| 125 | Inhibition of pancreatic cancer cell growth by designed peptides Jeffrey Hartgerink, Lorenzo Aulisa, Nico Foraz, Colin McGuckin | ||
| 126 | Inhibition of platelets aggregation by [D-Phe(Transcinnamoyl)-Pro-D-Arg-P1'-CONH2] peptides reversible inhibitors of thrombin Cristina Clement, Anna Babinska, Elizabeth Kornecki, Manfred Philipp | ||
| 127 | Light-activated oligonucleotide hairpins for regulating RNase H activity XinJing Tang, Julia L. Richards, Ivan J. Dmochowski | ||
| 128 | Live cell Staudinger ligation: A FRET-based fluorogenic phosphine Matthew J Hangauer, Carolyn R Bertozzi | ||
| 129 | Mannose/glucose functionalized dendrimers as tools for probing tunable multivalency Mark L. Wolfenden, Mary J. Cloninger | ||
| 130 | Mechanism of cellular uptake and delivery of guanidinoglycosides Lev Elson-Schwab, Pradip Chakarborty, Yitzhak Tor | ||
| 131 | Mechanisms for regulation via localization: Analysis of subcellular localization of polylactosamine-synthesizing glycosyltransferases Peter L. Lee, Julie A. Theriot, Jennifer J. Kohler | ||
| 132 | Mechanistic considerations of 8-oxoguanine incorporation into DNA and RNA from the nucleotide pool in human breast cancer cells Sang Soo Hah, Janna M. Mundt, Paul T. Henderson | ||
| 133 | Metal-dependent folding and catalysis in ribozymes: Applications of SDSL and EPR spectroscopy Victoria J DeRose, Nak-Kyoon Kim, Ayaluru Murali, Michael K. Bowman, Kathryn Green | ||
| 134 | Modified peptide nucleic acids: Studies of double-stranded DNA invasion and cellular viability Gaofei He, Anca Dragulescu-Andrasi, Srinivas Rapireddy, Danith H. Ly | ||
| 135 | Molecular dynamics simulations of asymmetric phospholipid bilayers with supra-physiological transmembrane potentials Matthew J. Ziegler, Wenji Victor Chang, D. Peter Tieleman, P. Thomas Vernier | ||
| 136 | Molecular dynamics simulations of the orientation of netropsin-DNA binding Ya-Yin Fang, Eric C. Long, Vernon R. Morris, William M. Southerland | ||
| 137 | Molecular light switches for controlling gene function XinJing Tang, Julia L. Richards, Ivan J. Dmochowski | ||
| 138 | Mutations near the active site of UmuC that cause E. coli hypersensitivity to UV light Penny Beuning, Graham Walker | ||
| 139 | Neutron diffraction studies of the bilayer membrane structure of lipopolysaccharides extracted from pseudomonas aeruginosa Thomas Abraham, Sarah Schooling, Mu Ping Nieh, Terry J. Beveridge, John Katsaras | ||
| 140 | Optical imaging of mitochondrial bioenergetics Julia Lyubovitsky, Joel A. Spencer, Tatiana B. Krasieva, Chung-ho Sun, Bogi Andersen, Bruce J. Tromberg | ||
| 141 | Optimization of light activated RNA interference through site specific modifications Samit Shah, Simon H. Friedman | ||
| 142 | Optimizing a simple biosensor for theophylline Brian D. McCarthy, Brenda S. DeLa Cruz, Thomas P. Shields | ||
| 143 | Perturbing TGF-β signal transduction to direct human embryonic stem cell fates Lingyin Li, Brendan P. Orner, Andrew P. Hinck, Laura L. Kiessling | ||
| 144 | Photo-reaction between the metabolic products of perspiration and the dyes on garments Liyuan Zhang, Dehua Zhuang, Sen Xu, Zhen Yang, Jinxin He | ||
| 145 | Photophysics in heme model compounds: An ultrafast spectroscopic study Jagannadha R. Challa, Tissa C. Gunaratne, M. Cather Simpson | ||
| 146 | Photoswitchable affinity labels for optical regulation of native potassium channels Matthew R. Banghart, Doris L. Fortin, Richard H. Kramer, Dirk Trauner | ||
| 147 | Probing the transcriptional machinery with short peptide ligands Chinmay Y. Majmudar, Jenifer K Lum, Anna K. Mapp | ||
| 148 | Protein fucosylation regulates neuronal morphology Heather E. Murrey, Cristal I. Gama, Scott B. Ficarro, Barbara Porton, Eric C. Peters, Linda C. Hsieh-Wilson | ||
| 149 | Protein interactions and electron transfer between cytochrome f and plastocyanin from the cyanobacterium Prochlorothrix hollandica Maria V Baranova, George S Bullerjahn | ||
| 150 | Protein labeling in live cells Youn-Hi Woo, Julio A Camarero, Lisa Stubbs | ||
| 151 | Quantification of cellular O-acetyl-ADP-ribose (OAADPr), a novel sirtuin metabolite, with HILIC LC-MS/MS Susan Lee, Lei Tong, John M. Denu | ||
| 152 | Reengineering the ligand specificity of bacterial chemotaxis using synthetic riboswitches Shana Topp, Justin P. Gallivan | ||
| 153 | Right- and left-handed three-helix bundles of gp41 TM domain from HIV-1: Molecular dynamics investigations Taryn Hartley, Jong Hwa Kim | ||
| 154 | Role of base stacking on the inhibition of pol η by Pyrene and 5-Nitroindole nucleotide triphosphates Ajay Kshetry, John Stephen Taylor | ||
| 155 | Sequencing, transcriptional analysis and comparative genomics of the vitamin B12 gene cluster of Lactobacillus reuteri Filipe Santos, Willem M. de Vos, Jeroen Hugenholtz | ||
| 156 | Spectrin interactions modify CD45 mobility on T cells: Single particle tracking reveals changes in lateral mobility upon cell activation Quentin Baca, Christopher W Cairo, Rossen Mirchev, David E Golan | ||
| 157 | Stability of prostaglandin glycerol esters in neuronal tissue Andrew Vila, Satish Kathuria, Daniele Piomelli, Lawrence J. Marnett | ||
| 158 | Structural details of the binding of RPA and ATRIP from NMR spectroscopy and cell biology Mark R. Ehrhardt, Heather L. Ball, Daniel A. Mordes, David Cortez, Walter J. Chazin | ||
| 159 | Studies on molecular modification and biological activity of one seaweed polysaccharide Wenjun Mao, Xiaoxue Zang | ||
| 160 | Studies on the primary structure of O-linked glycan chain of tea glycoprotein NIE Shaoping, XIE Mingyong | ||
| 161 | Study on antioxidant activity and chemical composition of the ether extracts of semen plantaginis Wan Yin, Mingyong Xie, Zhou Chao | ||
| 162 | Substrate specificity and novel regulation of DinB activity in DNA damage tolerance Daniel F. Jarosz, Veronica G. Godoy, Sharotka M. Simon, James C. Delaney, John M. Essigmann, Graham Walker | ||
| 163 | Synaptic maturation of cultured hippocampal neurons from fragile X mice Naveen Nagarajan, Mark F Bear | ||
| 164 | Synthesis and biochemical evaluation of non-hydrolyzable analogs of O-acetyl-ADP-ribose Lindsay R. Comstock, John M. Denu | ||
| 165 | Synthesis and evaluation of bioorthogonal pantetheine analogs for in vivo protein modification Jordan L. Meier, Andrew C Mercer, Michael D. Burkart | ||
| 166 | Synthesis of trace drug metabolites on multi-milligram scale: Production of 32-hydroxy-rifalazil as an example of metabolite synthesis of poorly water-soluble compound Vadim V. Mozhaev, Lyudmila V Mozhaeva, John P. Lindsay, Peter C. Michels, Yuri L. Khmelnitsky | ||
| 167 | Testing the conformational hypothesis of membrane permeability using cyclic peptide diastereomers R. Scott Lokey | ||
| 168 | Toward diagnosis of diabetes by NMR and multivariate analysis: Study of 1H NMR spectra of human serum in an integrated working environment Chen Peng, Omoshile O. Clement, Gregory M. Banik, Scott Ramos, Tao Wang, Bin Zia | ||
| 169 | Towards the structure and function of a novel RNA gene Monica Rae Jung Lares, Joseph Mendoza, William Scott | ||
| 170 | trans-2-Aminocyclohexanols as pH-triggered molecular switches Barbora Brazdova, Sombo Koo, Yuen Shan Wong, Andrey V. Samoshin, Ningrong Zhang, Andreas H. Franz, Xin Guo, Vyacheslav V. Samoshin | ||
| 171 | tRNA tertiary interactions. 1. Accurate energies of hydrogen bonded nucleic acid base pairs and triplets Romina Oliva, Anna Tramontano, Luigi Cavallo | ||
| 172 | tRNA tertiary interactions. 2. Strategies to reach stability: The 15-48 Levitt base pair Romina Oliva, Luigi Cavallo, Anna Tramontano | ||
| 173 | Using light illumination to control DNA condensation Anne-Laure M. Le Ny, C. Ted Lee | ||
| 174 | Paper Withdrawn | ||
Symposium Grid -- Division of Biological Chemistry -- Session Listing
The 232nd ACS National Meeting, San Francisco, CA, September 10-14, 2006